A/Prof. Mark Raftery

z9600507

Director

Category: Academic Staff
Research profile: Click to view

Biography

Education

BSc(Hons)(Organic Chemistry), University of Adelaide
PhD(Organic Chemistry), University of Adelaide

Role & Interests

S100 protein structure and function; biological mass spectrometry; identification and characterisation of plant allergens; protein post translational modifications; novel oxidative modifications of proteins.

Publications

Book Chapters

Ping P;Vondriska TM;Creighton CJ;Gandhi TK B;Yang Z;Menon R;Kwon MS;Cho SY;Drwal G;Kellmann M;Peri S;Suresh S;Gronborg M;Molina H;Chaerkady R;Rekha B;Shet AS;Gerszten RE;Wu H;Raftery M;Wasinger V;Schulz-Knappe P;Hanash SM;Paik YK;Hancock WS;States DJ;Omenn GS;Pandey A, 2006, 'A functional annotation of subproteomes in human plasma', in Exploring the Human Plasma Proteome, pp. 329 - 351, http://dx.doi.org/10.1002/9783527609482.ch16
Cavicchioli R;Goodchild A;Raftery M, 2005, 'Proteomics of Archaea', in Microbial Proteomics: Functional Biology of Whole Organisms, pp. 57 - 72, http://dx.doi.org/10.1002/0471973165.ch5
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Raftery MJ, 2000, 'Methods in Molecular Biology', in Mass spectrometry of proteins and peptides, edn. Original, Humana Press, Totowa, USA, pp. 27 - 39

Conference Abstracts

Dolai S;Sia KC S;Robbins AK;Zhong L;Heatley S;Vincent T;Hochgraefe F;Kurmasheva RT;White DL;Houghton PJ;Smith MA;Teachey DT;Daly RJ;Raftery MJ;Lock RB, 2014, 'Targeted Cancer Therapy in High-Risk Pediatric Leukemia Using Global Phosphotyrosine Profiling', in BLOOD, AMER SOC HEMATOLOGY, Vol. 124, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000349242705041&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a

Conference Papers

Wang P;Yang JY H;Raftery M;Zhong L;Wilson SR, 2013, 'Latin square dataset for evaluating the accuracy of mass spectrometry-based protein identification and quantification', in Proceedings - 2013 IEEE International Conference on Bioinformatics and Biomedicine, IEEE BIBM 2013, pp. 65 - 67, http://dx.doi.org/10.1109/BIBM.2013.6732765
Velonas VM;Raftery M;Zhong L;Poljak A;Assinder S;Woo H;Remedios CD, 2012, 'Peptide-based mass spectrometry identification of exosome proteins from prostate cancer cell lines', in BJU INTERNATIONAL, WILEY-BLACKWELL, Darwin, AUSTRALIA, pp. 20 - 21, presented at 65th Annual Scientific Meeting on Urological-Society-of-Australia-and-New Zealand, Darwin, AUSTRALIA, 21 - 24 April 2012, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000303003900030&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a
Lee BY;Hochgraefe F;Lin HM;Castillo L;Raftery M;Horvath LG;Daly RJ, 2012, 'Overcoming Docetaxel Resistance in Prostate Cancer by Targeting FAK Phosphorylation, and Its Mode of Action', in EUROPEAN JOURNAL OF CANCER, ELSEVIER SCI LTD, European Org Res & Treatment Canc (EORTC), Dublin, IRELAND, pp. 48 - 49, presented at 24th EORTC-NCI-AACR Symposium on Molecular Targets and Cancer Therapeutics, European Org Res & Treatment Canc (EORTC), Dublin, IRELAND, 06 - 09 November 2012, http://dx.doi.org/10.1016/S0959-8049(12)71956-1
Sirianni A;Kaakoush NO;Raftery M;Mitchell HM, 2012, 'HELICOBACTER PULLORUM - A POTENTIAL GASTROINTESTINAL PATHOGEN?', in HELICOBACTER, WILEY-BLACKWELL, Ljubljana, SLOVENIA, pp. 78 - 78, presented at 25th International Workshop on Helicobacter and Related Bacteria in Chronic Digestive Inflammation and Gastric Cancer, Ljubljana, SLOVENIA, 13 - 15 September 2012, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000308581600046&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a
Prior MJ;Larance M;Soul J;Burchfield J;Kanazawa H;Raftery M;James DE, 2010, 'Quantitative proteomic analysis of the adipocyte plasma membrane proteome identifies the Sodium/Hydrogen exchanger NHE6 as a novel insulin-responsive protein', in DIABETOLOGIA, SPRINGER, Stockholm, SWEDEN, pp. S114 - S114, presented at 46th Annual Meeting of the European-Association-for-the- Study-of-Diabetes (EASD), Stockholm, SWEDEN, 20 - 24 September 2010, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000280689700260&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a
Poljak A;Hill MA;Raftery MJ;Caplan GA, 2010, 'Quantitative Proteomics of Delirium CSF', in Human Proteome World Congress Sydney 2010, ICMS Australasia Pty Ltd, Sydney, Australia, pp. 59 - 59, presented at HUPO-9th Annual World Congress, Sydney, Australia, 19 - 23 September 2010, http://www.hupo.org/congress/congress_2010/downloads/HUPO%20Prog%20bookWEB.pdf
Geczy CL;Gomes L;Raftery M;Zhao J;Endoh I;Endoh Y;Thomas P, 2009, 'S100A8-An oxidant scavenger and immune modulator in allergic inflammation', in CYTOKINE, ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD, Lisbon, PORTUGAL, pp. 40 - 40, presented at Tri-Society Annual Conference of the International-Cytokine-Society/International-Society-of-Interferon-and-Cytokine-Research/Society-of-Leukocyte-Biology, Lisbon, PORTUGAL, 17 - 21 October 2009, http://dx.doi.org/10.1016/j.cyto.2009.07.352
Lim SY;Raftery M;Cai H;Thomas S;Hsu K;Geczy CL, 2008, 'S-nitrosylated S100A8-novel anti-inflammatory properties', in CYTOKINE, ACADEMIC PRESS LTD ELSEVIER SCIENCE LTD, Montreal, CANADA, pp. 263 - 263, presented at 7th Joint Conference of the International-Cytokine-Society/International-Society-for-Interferon-and-Cytoklin-Research, Montreal, CANADA, 12 - 16 October 2008, http://dx.doi.org/10.1016/j.cyto.2008.07.157
Kovach Z;Tu QV;Mendz GL;Okoli AS;Raftery MJ, 2008, 'A proteome and transcriptome analysis of the response of human liver carcinoma Huh7 and HepG2 cells to H. bilis coculture', in HELICOBACTER, WILEY-BLACKWELL, Riga, LATVIA, pp. 398 - 398, presented at 21st International Workshop on Helicobacter and Related Bacteria in Chronic Digestive Inflammation and Gastric Cancer, Riga, LATVIA, 18 - 20 September 2008, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000258404600027&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a
Lim SY;Raftery M;Cai H;Thomas S;Geczy C, 2008, 'S-nitrosylated S100A8 suppresses mast cell activation: Novel anti-inflammatory properties', in JOURNAL OF LEUKOCYTE BIOLOGY, FEDERATION AMER SOC EXP BIOL, Pittsburgh, PA, pp. A18 - A18, presented at 3rd International Damage Associated Molecular Pattern Molecules (DAMPs) and Alarmins Symposium, Pittsburgh, PA, 30 August - 02 September 2008, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000258091600049&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a
Kaakoush NO;Raftery M;Mendz GL, 2008, 'Molecular responses of Campylobacter jejuni to cadmium stress', in FEBS Journal, pp. 5021 - 5033, http://dx.doi.org/10.1111/j.1742-4658.2008.06636.x
Rahimi F;Raftery MJ;Halliday GM;Geczy C;Shepherd CE, 2006, 'Proteomic analysis of formalin-fixed brain tissue is potentially applicable to laser-microdissected specimens', in Proceedings of Aust Neuroscience Society, 26th Annual meeting of the Australian Neuroscience Society, Sydney, pp. 41 - 41, presented at 26th Annual meeting of the Australian Neuroscience Society, Sydney, 31 January - 03 February 2006
Rahimi F;Goyette J;Raftery MJ;Shepherd CE;Halliday GM;Geczy C, 2005, 'S100A9, an inflammation-associated calcium-binding protein, is a binding partner for various redox-regulating proteins in familial Alzheimer's disease', in Journal of the Neurological Sciences, Elsevier Science BV, Sydney, pp. S298 - S298, presented at XVIIIth World Congress of Neurology, Sydney, 05 - 11 November 2005
Pimanda JE;Annis DS;Raftery MJ;Mosher DF;Chesterman CN;Hogg PJ, 2002, 'The von Willebrand factor reducing activity of thrombospondin-1 centers around a free thiol at position 974.', in BLOOD, AMER SOC HEMATOLOGY, PHILADELPHIA, PENNSYLVANIA, pp. 257A - 258A, presented at 44th Annual Meeting of the American-Society-of-Hematology, PHILADELPHIA, PENNSYLVANIA, 06 - 10 December 2002, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000179184700981&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a

Conference Posters

MAsoudi S;Zhong L;Raftery M;willcox M, 2013, 'Method development for analysis of tear proteins using Multiple Reaction Monitoring', presented at Association for Research in Vision and Ophthalmology, 05 - 09 May 2013
Rahimi F;Goyette J;Raftery M;Shepherd C;Halliday G;Geczy C, 2005, 'S100A9, an inflammation-associated calcium-binding protein, is a binding partner for various redox-regulating proteins in familial Alzheimer's disease', Sydney, AUSTRALIA, Vol. 238, pp. S298 - S298, presented at 18th World Congress of Neurology, Sydney, AUSTRALIA, 05 - 11 November 2005, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000235088002393&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a

Conference Presentations

Marcal H;Dinnes D;Raftery MJ;Labow R;McFarland CD;Santerre J;Mahler SM, 2005, 'The effect of material chemistry on cellular morphology and membrane surface-interface proteins: An innovative explorative proteomics technique', presented at 8th Annual Meeting of Tissue Engineering Society International, Shanghai, P.R. China, 22 - 25 October 2005

Journal articles

Williams TJ;Allen MA;Liao Y;Raftery MJ;Cavicchioli R, 2019, 'Sucrose Metabolism in Haloarchaea: Reassessment Using Genomics, Proteomics, and Metagenomics', Applied and environmental microbiology, vol. 85, http://dx.doi.org/10.1128/AEM.02935-18
Santiago FS;Sanchez-Guerrero E;Zhang G;Zhong L;Raftery MJ;Khachigian LM, 2019, 'Extracellular signal-regulated kinase-1 phosphorylates early growth response-1 at serine 26', Biochemical and Biophysical Research Communications, vol. 510, pp. 345 - 351, http://dx.doi.org/10.1016/j.bbrc.2019.01.019
Unnikrishnan A;Vo AN Q;Pickford R;Raftery MJ;Nunez AC;Verma A;Hesson LB;Pimanda JE, 2018, 'AZA-MS: A novel multiparameter mass spectrometry method to determine the intracellular dynamics of azacitidine therapy in vivo', Leukemia, vol. 32, pp. 900 - 910, http://dx.doi.org/10.1038/leu.2017.340
Wai Luu LD;Octavia S;Zhong L;Raftery MJ;Sintchenko V;Lan R, 2018, 'Comparison of the whole cell proteome and secretome of epidemic bordetella pertussis strains from the 2008–2012 Australian epidemic under sulfate-modulating conditions', Frontiers in Microbiology, vol. 9, http://dx.doi.org/10.3389/fmicb.2018.02851
Luu LD W;Octavia S;Zhong L;Raftery MJ;Sintchenko V;Lan R, 2018, 'Proteomic Adaptation of Australian Epidemic Bordetella pertussis', Proteomics, vol. 18, http://dx.doi.org/10.1002/pmic.201700237
Williams TJ;Liao Y;Ye J;Kuchel RP;Poljak A;Raftery MJ;Cavicchioli R, 2017, 'Cold adaptation of the Antarctic haloarchaea Halohasta litchfieldiae and Halorubrum lacusprofundi', Environmental Microbiology, vol. 19, pp. 2210 - 2227, http://dx.doi.org/10.1111/1462-2920.13705
Erdmann S;Tschitschko B;Zhong L;Raftery MJ;Cavicchioli R, 2017, 'A plasmid from an Antarctic haloarchaeon uses specialized membrane vesicles to disseminate and infect plasmid-free cells', Nature Microbiology, vol. 2, pp. 1446 - 1455, http://dx.doi.org/10.1038/s41564-017-0009-2
Strbenac D;Zhong L;Raftery MJ;Wang P;Wilson SR;Armstrong NJ;Yang JY H, 2017, 'Quantitative Performance Evaluator for Proteomics (QPEP): Web-based Application for Reproducible Evaluation of Proteomics Preprocessing Methods', Journal of Proteome Research, vol. 16, pp. 2359 - 2369, http://dx.doi.org/10.1021/acs.jproteome.6b00882
Luu LD W;Octavia S;Zhong L;Raftery M;Sintchenko V;Lan R, 2017, 'Characterisation of the Bordetella pertussis secretome under different media', Journal of Proteomics, vol. 158, pp. 43 - 51, http://dx.doi.org/10.1016/j.jprot.2017.02.010
Friedrich MG;Hancock SE;Raftery MJ;Truscott RJ W, 2016, 'Isoaspartic acid is present at specific sites in myelin basic protein from multiple sclerosis patients: could this represent a trigger for disease onset?', Acta neuropathologica communications, vol. 4, pp. 83, http://dx.doi.org/10.1186/s40478-016-0348-x
Unnikrishnan A;Guan YF;Huang Y;Beck D;Thoms JA I;Peirs S;Knezevic K;Ma S;De Walle IV;De Jong ID E;Ali Z;Zhong L;Raftery MJ;Taghon T;Larsson J;MacKenzie KL;Van Vlierberghe P;Wong JW H;Pimanda JE, 2016, 'A quantitative proteomics approach identifies ETV6 and IKZF1 as new regulators of an ERG-driven transcriptional network', Nucleic Acids Research, vol. 44, pp. 10644 - 10661, http://dx.doi.org/10.1093/nar/gkw804
Liao Y;Williams TJ;Ye J;Charlesworth J;Burns BP;Poljak A;Raftery MJ;Cavicchioli R, 2016, 'Morphological and proteomic analysis of biofilms from the Antarctic archaeon, Halorubrum lacusprofundi', Scientific Reports, vol. 6, http://dx.doi.org/10.1038/srep37454
Park M;Raftery MJ;Thomas PS;Geczy CL;Bryant K;Tedla N, 2016, 'Leukocyte immunoglobulin-like receptor B4 regulates key signalling molecules involved in FcγRI-mediated clathrin-dependent endocytosis and phagocytosis', Scientific Reports, vol. 6, http://dx.doi.org/10.1038/srep35085
Jayasena T;Poljak A;Braidy N;Zhong L;Rowlands B;Muenchhoff J;Grant R;Smythe G;Teo C;Raftery M;Sachdev P, 2016, 'Application of Targeted Mass Spectrometry for the Quantification of Sirtuins in the Central Nervous System', Scientific Reports, vol. 6, http://dx.doi.org/10.1038/srep35391
Muenchhoff J;Poljak A;Thalamuthu A;Gupta VB;Chatterjee P;Raftery M;Masters CL;Morris JC;Bateman RJ;Fagan AM;Martins RN;Sachdev PS, 2016, 'Changes in the plasma proteome at asymptomatic and symptomatic stages of autosomal dominant Alzheimer's disease', Scientific Reports, vol. 6, http://dx.doi.org/10.1038/srep29078
Tschitschko B;Williams TJ;Allen MA;Zhong L;Raftery MJ;Cavicchioli R, 2016, 'Ecophysiological distinctions of haloarchaea from a hypersaline Antarctic lake as determined by metaproteomics', Applied and Environmental Microbiology, vol. 82, pp. 3165 - 3173, http://dx.doi.org/10.1128/AEM.00473-16
Dolai S;Sia KC S;Robbins AK;Zhong L;Heatley SL;Vincent TL;Hochgräfe F;Sutton R;Kurmasheva RT;Revesz T;White DL;Houghton PJ;Smith MA;Teachey DT;Daly RJ;Raftery MJ;Lock RB, 2016, 'Quantitative phosphotyrosine profiling of patient-derived xenografts identifies therapeutic targets in pediatric leukemia', Cancer Research, vol. 76, pp. 2766 - 2777, http://dx.doi.org/10.1158/0008-5472.CAN-15-2786
Alexova R;Dang TC;Fujii M;Raftery MJ;Waite TD;Ferrari BC;Neilan BA, 2016, 'Specific global responses to N and Fe nutrition in toxic and non-toxic Microcystis aeruginosa', Environmental Microbiology, vol. 18, pp. 401 - 413, http://dx.doi.org/10.1111/1462-2920.12958
Richards SL;Cawley AT;Cavicchioli R;Suann CJ;Pickford R;Raftery MJ, 2016, 'Aptamer based peptide enrichment for quantitative analysis of gonadotropin-releasing hormone by LC-MS/MS', Talanta, vol. 150, pp. 671 - 680, http://dx.doi.org/10.1016/j.talanta.2016.01.006
Lyons B;Friedrich M;Raftery M;Truscott R, 2016, 'Amyloid Plaque in the Human Brain Can Decompose from Aβ(1-40/1-42) by Spontaneous Nonenzymatic Processes', Analytical Chemistry, vol. 88, pp. 2675 - 2684, http://dx.doi.org/10.1021/acs.analchem.5b03891
Tschitschko B;Williams TJ;Allen MA;Páez-Espino D;Kyrpides N;Zhong L;Raftery MJ;Cavicchioli R, 2015, 'Antarctic archaea-virus interactions: Metaproteome-led analysis of invasion, evasion and adaptation', ISME Journal, vol. 9, pp. 2094 - 2107, http://dx.doi.org/10.1038/ismej.2015.110
Gardiner M;Fernandes ND;Nowakowski D;Raftery M;Kjelleberg S;Zhong L;Thomas T;Egan S, 2015, 'VarR controls colonization and virulence in the marine macroalgal pathogen Nautella italica R11', Frontiers in Microbiology, vol. 6, http://dx.doi.org/10.3389/fmicb.2015.01130
Percy AJ;Tamura-Wells J;Albar JP;Aloria K;Amirkhani A;Araujo GD T;Arizmendi JM;Blanco FJ;Canals F;Cho JY;Colomé-Calls N;Corrales FJ;Domont G;Espadas G;Fernandez-Puente P;Gil C;Haynes PA;Hernáez ML;Kim JY;Kopylov A;Marcilla M;McKay MJ;Mirzaei M;Molloy MP;Ohlund LB;Paik YK;Paradela A;Raftery M;Sabidó E;Sleno L;Wilffert D;Wolters JC;Yoo JS;Zgoda V;Parker CE;Borchers CH, 2015, 'Inter-laboratory evaluation of instrument platforms and experimental workflows for quantitative accuracy and reproducibility assessment', EuPA Open Proteomics, vol. 8, pp. 6 - 15, http://dx.doi.org/10.1016/j.euprot.2015.06.001
Jayasena T;Poljak A;Braidy N;Smythe G;Raftery M;Hill M;Brodaty H;Trollor J;Kochan N;Sachdev P, 2015, 'Upregulation of glycolytic enzymes, mitochondrial dysfunction and increased cytotoxicity in glial cells treated with Alzheimer's disease plasma', PLoS ONE, vol. 10, http://dx.doi.org/10.1371/journal.pone.0116092
Alexova R;Dang TC;Fujii M;Raftery MJ;Waite TD;Ferrari BC;Neilan BA, 2015, 'Specific global responses to N and Fe nutrition in toxic and non-toxic Microcystis aeruginosa', Environmental Microbiology, http://dx.doi.org/10.1111/1462-2920.12958
Kaakoush NO;Deshpande NP;Man SM;Burgos-Portugal JA;Khattak FA;Raftery MJ;Wilkins MR;Mitchell HM, 2015, 'Transcriptomic and proteomic analyses reveal key innate immune signatures in the host response to the gastrointestinal pathogen Campylobacter concisus', Infection and Immunity, vol. 83, pp. 832 - 845, http://dx.doi.org/10.1128/IAI.03012-14
Muenchhoff J;Poljak A;Song F;Raftery M;Brodaty H;Duncan M;McEvoy M;Attia J;Schofield PW;Sachdev PS, 2014, 'Plasma protein profiling of mild cognitive impairment and Alzheimer's disease across two independent cohorts', Journal of Alzheimer's Disease, vol. 43, pp. 1355 - 1373, http://dx.doi.org/10.3233/JAD-141266
Hou X;McMillan M;Coumans JV F;Poljak A;Raftery MJ;Pereg L, 2014, 'Cellular responses during morphological transformation in Azospirillum brasilense and its flcA knockout mutant', PLoS ONE, vol. 9, http://dx.doi.org/10.1371/journal.pone.0114435
Liao BM;Raddatz K;Zhong L;Parker BL;Raftery MJ;Schmitz-Peiffer C, 2014, 'Proteomic analysis of livers from fat-fed mice deficient in either PKCδ or PKCε identifies Htatip2 as a regulator of lipid metabolism', Proteomics, vol. 14, pp. 2578 - 2587, http://dx.doi.org/10.1002/pmic.201400202
Lee H;Ma R;Grimm MC;Riordan SM;Lan R;Zhong L;Raftery M;Zhang L, 2014, 'Examination of the anaerobic growth of Campylobacter concisus strains', International Journal of Microbiology, vol. 2014, http://dx.doi.org/10.1155/2014/476047
Raftery MJ, 2014, 'Determination of oxidative protein modifications using mass spectrometry', Redox Report, vol. 19, pp. 140 - 147, http://dx.doi.org/10.1179/1351000214y.0000000089
Masoudi S;Zhong L;Raftery MJ;Stapleton FJ;Willcox MD, 2014, 'Method development for quantification of five tear proteins using selected reaction monitoring (SRM) mass spectrometry', Investigative Ophthalmology and Visual Science, vol. 55, pp. 767 - 775, http://dx.doi.org/10.1167/iovs.13-12777
Song F;Poljak A;Kochan NA;Raftery M;Brodaty H;Smythe GA;Sachdev PS, 2014, 'Plasma protein profiling of Mild Cognitive Impairment and Alzheimer's disease using iTRAQ quantitative proteomics', Proteome Science, vol. 12, http://dx.doi.org/10.1186/1477-5956-12-5
Poljak A;Hill M;Hall RJ;MacLullich AM;Raftery MJ;Tai J;Yan S;Caplan GA, 2014, 'Quantitative proteomics of delirium cerebrospinal fluid', Translational Psychiatry, vol. 4, http://dx.doi.org/10.1038/tp.2014.114
Li A;Estigoy C;Raftery M;Cameron D;Odeberg J;Pontén F;Lal S;dos Remedios CG, 2013, 'Heart research advances using database search engines, human protein atlas and the sydney heart bank', Heart Lung and Circulation, vol. 22, pp. 819 - 826, http://dx.doi.org/10.1016/j.hlc.2013.06.006
Lee BY;Hochgräfe F;Lin HM;Castillo L;Wu J;Raftery MJ;Martin Shreeve S;Horvath LG;Daly RJ, 2013, 'Phosphoproteomic profiling identifies focal adhesion kinase as a mediator of docetaxel resistance in castrate-resistant prostate cancer', Molecular Cancer Therapeutics, vol. 13, pp. 190 - 201, http://dx.doi.org/10.1158/1535-7163.MCT-13-0225-T
Lee TH Y;Mitchell A;Lau SL;An H;Rajeaskariah P;Wasinger V;Raftery M;Bryant K;Tedla N, 2013, 'Glycosylation in a mammalian expression system is critical for the production of functionally active leukocyte immunoglobulin-like receptor A3 protein', Journal of Biological Chemistry, vol. 288, pp. 32873 - 32885, http://dx.doi.org/10.1074/jbc.M113.478578
Hooi MY S;Raftery MJ;Truscott RJ W, 2013, 'Age-dependent racemization of serine residues in a human chaperone protein', Protein Science, vol. 22, pp. 93 - 100, http://dx.doi.org/10.1002/pro.2191
Hooi MY S;Raftery MJ;Truscott RJ W, 2013, 'Accelerated aging of Asp 58 in αA crystallin and human cataract formation', Experimental Eye Research, vol. 106, pp. 34 - 39, http://dx.doi.org/10.1016/j.exer.2012.10.013
Gomes LH;Raftery MJ;Yan WX;Goyette JD;Thomas PS;Geczy CL, 2013, 'S100A8 and S100A9 - Oxidant scavengers in inflammation', Free Radical Biology and Medicine, vol. 58, pp. 170 - 186, http://dx.doi.org/10.1016/j.freeradbiomed.2012.12.012
Lee BY;Hochgraefe F;Lin H-M;Castillo L;Wu J;Raftery M;Shreeve SM;Horvath L;Daly R, 2013, 'Focal adhesion kinase: a mediator of docetaxel-resistance in castrate resistant prostate cancer', BJU INTERNATIONAL, vol. 112, pp. 38 - 39, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000321969100100&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a
Sirianni A;Kaakoush NO;Raftery MJ;Mitchell HM, 2013, 'The pathogenic potential of helicobacter pullorum: Possible role for the type VI secretion system', Helicobacter, vol. 18, pp. 102 - 111, http://dx.doi.org/10.1111/hel.12009
Burgos-Portugal JA;Kaakoush NO;Raftery MJ;Mitchell HM, 2012, 'Pathogenic potential of Campylobacter ureolyticus', Infection and Immunity, vol. 80, pp. 883 - 890, http://dx.doi.org/10.1128/IAI.06031-11
Okoli AS;Raftery MJ;Mendz GL, 2012, 'Effects of human and porcine bile on the proteome of Helicobacter hepaticus', Proteome Science, vol. 10, http://dx.doi.org/10.1186/1477-5956-10-27
Hooi MY S;Raftery MJ;Truscott RJ W, 2012, 'Racemization of two proteins over our lifespan: Deamidation of asparagine 76 in γS crystallin is greater in cataract than in normal lenses across the age range', Investigative Ophthalmology and Visual Science, vol. 53, pp. 3554 - 3561, http://dx.doi.org/10.1167/iovs.11-9085
Hooi MY S;Raftery MJ;Truscott RJ W, 2012, 'Age-dependent deamidation of glutamine residues in human γS crystallin: Deamidation and unstructured regions', Protein Science, vol. 21, pp. 1074 - 1079, http://dx.doi.org/10.1002/pro.2095
Hart-Smith G;Raftery MJ, 2012, 'Detection and characterization of low abundance glycopeptides via higher-energy c-trap dissociation and orbitrap mass analysis', Journal of the American Society for Mass Spectrometry, vol. 23, pp. 124 - 140, http://dx.doi.org/10.1007/s13361-011-0273-y
Omali NB;Zhao Z;Zhong L;Raftery MJ;Zhu H;Ozkan J;Willcox M, 2012, 'Quantification of protein deposits on silicone hydrogel materials using stable-isotopic labeling and multiple reaction monitoring', Biofouling, vol. 28, pp. 697 - 709, http://dx.doi.org/10.1080/08927014.2012.702763
Burgos-Portugal JA;Kaakoush NO;Raftery MJ;Mitchell HM, 2012, 'Pathogenic potential of Campylobacter ureolyticus.', Infect Immun, vol. 80, pp. 883 - 890, http://dx.doi.org/10.1128/IAI.06031-11
Okoli AS;Raftery MJ;Mendz GL, 2012, 'Comparison of Helicobacter bilis-Associated Protein Expression in Huh7 Cells Harbouring HCV Replicon and in Replicon-Cured Cells', Journal of Hepatology, vol. 2012, http://dx.doi.org/10.1155/2012/501671
Raddatz K;Turner N;Frangioudakis G;Liao BM;Pedersen DJ;Cantley J;Wilks D;Preston E;Hegarty BD;Leitges M;Raftery MJ;Biden TJ;Schmitz-Peiffer C, 2011, 'Time-dependent effects of Prkce deletion on glucose homeostasis and hepatic lipid metabolism on dietary lipid oversupply in mice', Diabetologia, vol. 54, pp. 1447 - 1456, http://dx.doi.org/10.1007/s00125-011-2073-0
Coumans JV F;Harvey J;Backhouse D;Poljak A;Raftery MJ;Nehl D;Katz ME;Pereg L, 2011, 'Proteomic assessment of host-associated microevolution in the fungus Thielaviopsis basicola', Environmental Microbiology, vol. 13, pp. 576 - 588, http://dx.doi.org/10.1111/j.1462-2920.2010.02358.x
Kovach Z;Kaakoush NO;Lamb S;Zhang L;Raftery MJ;Mitchell H, 2011, 'Immunoreactive proteins of Campylobacter concisus, an emergent intestinal pathogen', FEMS Immunology and Medical Microbiology, vol. 63, pp. 387 - 396, http://dx.doi.org/10.1111/j.1574-695X.2011.00864.x
Lim SY;Raftery MJ;Geczy CL, 2011, 'Oxidative modifications of DAMPs suppress inflammation: The case for S100A8 and S100A9', Antioxidants and Redox Signaling, vol. 15, pp. 2235 - 2248, http://dx.doi.org/10.1089/ars.2010.3641
Deshpande NP;Kaakoush NO;Mitchell H;Janitz K;Raftery MJ;Li SS;Wilkins MR, 2011, 'Sequencing and validation of the genome of a Campylobacter concisus reveals Intra-Species diversity', PLoS ONE, vol. 6, http://dx.doi.org/10.1371/journal.pone.0022170
Kaakoush NO;Deshpande NP;Wilkins MR;Tan CG;Burgos-Portugal JA;Raftery MJ;Day AS;Lemberg DA;Mitchell H, 2011, 'The pathogenic potential of campylobacter concisus strains associated with chronic intestinal diseases', PLoS ONE, vol. 6, http://dx.doi.org/10.1371/journal.pone.0029045
Daly RJ;Hochgraefe F;Croucher DR;Zhang L;Rickwood D;Browne BC;Tactacan C;Raftery M, 2011, 'A novel tyrosine kinase signaling pathway in human basal breast cancer', CANCER RESEARCH, vol. 71, http://dx.doi.org/10.1158/1538-7445.AM2011-3131
Cheng Z;Chan AK ;Lewis CR;Thomas PS ;Raftery MJ, 2011, 'Comparative Proteomics Analysis of Exhaled Breath Condensate in Lung Cancer Patients', Journal of Cancer Therapy, vol. 02, pp. 1 - 8, http://dx.doi.org/10.4236/jct.2011.21001
Lauro FM;Demaere MZ;Yau S;Brown MV;Ng C;Wilkins D;Raftery MJ;Gibson JA;Andrews-Pfannkoch C;Lewis M;Hoffman JM;Thomas T;Cavicchioli R, 2011, 'An integrative study of a meromictic lake ecosystem in Antarctica', ISME Journal, vol. 5, pp. 879 - 895, http://dx.doi.org/10.1038/ismej.2010.185
Lee MH;Lalwani P;Raftery MJ;Matthaei M;Lutteke N;Kirsanovas S;Binder M;Ulrich RG;Giese T;Wolff T;Kruger DH;Schonrich G, 2011, 'RNA helicase retinoic acid-inducible gene I as a sensor of Hantaan virus replication.', Journal of General Virology, vol. 92, pp. 2191 - 2200
Coumans JVF; Moens PDJ; Poljak A; Al-Jaaidi S; Pereg L; Raftery MJ, 2010, 'Plant-extract-induced changes in the proteome of the soil-borne pathogenic fungus Thielaviopsis basicola', Proteomics, vol. 10, pp. 1573 - 1591, http://dx.doi.org/10.1002/pmic.200900301
Lim Y-A;Rhein V;Baysang G;Meier F;Poljak A;Raftery MJ;Guilhaus M;Ittner LM;Eckert A;Götz J, 2010, 'Aβ and human amylin share a common toxicity pathway via mitochondrial dysfunction', Proteomics, vol. 10, pp. 1621 - 1633
Lim SY;Raftery MJ;Goyette J;Geczy CL, 2010, 'S-glutathionylation regulates inflammatory activities of S100A9', Journal of Biological Chemistry, vol. 285, pp. 14377 - 14388, http://dx.doi.org/10.1074/jbc.M109.075242
Williams TJ;Burg DW;Ertan H;Raftery MJ;Poljak A;Guilhaus M;Cavicchioli R, 2010, 'Global proteomic analysis of the insoluble, soluble, and supernatant fractions of the psychrophilic archaeon Methanococcoides burtonii part II: The effect of different methylated growth substrates', Journal of Proteome Research, vol. 9, pp. 653 - 663, http://dx.doi.org/10.1021/pr9005102
Okoli AS;Wilkins MR;Raftery MJ;Mendz GL, 2010, 'Response of helicobacter hepaticus to bovine bile', Journal of Proteome Research, vol. 9, pp. 1374 - 1384, http://dx.doi.org/10.1021/pr900915f
Kaakoush NO;Man SM;Lamb S;Raftery MJ;Wilkins MR;Kovach Z;Mitchell H, 2010, 'The secretome of Campylobacter concisus', FEBS Journal, vol. 277, pp. 1606 - 1617, http://dx.doi.org/10.1111/j.1742-4658.2010.07587.x
Terentis AC;Freewan M;Sempértegui Plaza TS;Raftery MJ;Stocker R;Thomas SR, 2010, 'The selenazal drug ebselen potently inhibits indoleamine 2,3-dioxygenase by targeting enzyme cysteine residues', Biochemistry, vol. 49, pp. 591 - 600, http://dx.doi.org/10.1021/bi901546e
Muenchhoff J;Siddiqui KS;Poljak A;Raftery MJ;Barrow KD;Neilan BA, 2010, 'A novel prokaryotic l-arginine: Glycine amidinotransferase is involved in cylindrospermopsin biosynthesis', FEBS Journal, vol. 277, pp. 3844 - 3860, http://dx.doi.org/10.1111/j.1742-4658.2010.07788.x
Ting L;Williams TJ;Cowley MJ;Lauro FM;Guilhaus M;Raftery MJ;Cavicchioli R, 2010, 'Cold adaptation in the marine bacterium, Sphingopyxis alaskensis, assessed using quantitative proteomics', Environmental Microbiology, vol. 12, pp. 2658 - 2676, http://dx.doi.org/10.1111/j.1462-2920.2010.02235.x
Lim Y-A;Rhein V;Baysang G;Meier F;Poljak A;Raftery MJ;Guilhaus M;Ittner LM;Eckert A;Gotz J, 2010, 'Ab and human amylin share a common toxicity pathway via mitochondrial dysfunction', Proteomics, vol. 10, pp. 1621 - 1633
Tsoi BM;Beckhouse AG;Gelling CL;Raftery MJ;Chiu J;Tsoi AM;Lauterbach L;Rogers PJ;Higgins VJ;Dawes IW, 2009, 'Essential role of one-carbon metabolism and Gcn4p and Bas1p transcriptional regulators during adaptation to anaerobic growth of Saccharomyces cerevisiae', Journal of Biological Chemistry, vol. 284, pp. 11205 - 11215, http://dx.doi.org/10.1074/jbc.M809225200
Lu HK;Rentero C;Raftery MJ;Borges L;Bryant K;Tedla N, 2009, 'Leukocyte Ig-like receptor B4 (LILRB4) is a potent inhibitor of FcγRI-mediated monocyte activation via dephosphorylation of multiple kinases', Journal of Biological Chemistry, vol. 284, pp. 34839 - 34848, http://dx.doi.org/10.1074/jbc.M109.035683
Woodward M;Croft KD;Mori TA;Headlam H;Wang XS;Suarna C;Raftery MJ;MacMahon SW;Stocker R, 2009, 'Association between both lipid and protein oxidation and the risk of fatal or non-fatal coronary heart disease in a human population', Clinical Science, vol. 116, pp. 53 - 60, http://dx.doi.org/10.1042/CS20070404
Su YL;Raftery MJ;Goyette J;Hsu K;Geczy CL, 2009, 'Oxidative modifications of S100 proteins: Functional regulation by redox', Journal of Leukocyte Biology, vol. 86, pp. 577 - 587, http://dx.doi.org/10.1189/jlb.1008608
Hochgrafe F;Cubas AP;Lehrbach G;Raftery M;Guilhaus M;Daly R, 2009, 'Definition of a tyrosine phosphorylation signature characteristic of basal breast cancer cells', CANCER RESEARCH, vol. 69, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000209701804189&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a
Coumans JV F;Poljak A;Raftery MJ;Backhouse D;Pereg-Gerk L, 2009, 'Analysis of cotton (gossypium hirsutum) root proteomes during a compatible interaction with the black root rot fungus Thielaviopsis basicola', Proteomics, vol. 9, pp. 335 - 349, http://dx.doi.org/10.1002/pmic.200800251
Leuko S;Raftery MJ;Burns BP;Walter MR;Neilan BA, 2009, 'Global protein-level responses of halobacterium salinarum NRC-1 to prolonged changes in external sodium chloride concentrations', Journal of Proteome Research, vol. 8, pp. 2218 - 2225, http://dx.doi.org/10.1021/pr800663c
Huang KY;Filarsky M;Padula MP;Raftery MJ;Herbert BR;Wilkins MR, 2009, 'Micropreparative fractionation of the complexome by blue native continuous elution electrophoresis', Proteomics, vol. 9, pp. 2494 - 2502, http://dx.doi.org/10.1002/pmic.200800525
Matallana-Surget S;Joux F;Raftery MJ;Cavicchioli R, 2009, 'The response of the marine bacterium Sphingopyxis alaskensis to solar radiation assessed by quantitative proteomics', Environmental Microbiology, vol. 11, pp. 2660 - 2675, http://dx.doi.org/10.1111/j.1462-2920.2009.01992.x
Ting L;Cowley MJ;Hoon SL;Guilhaus M;Raftery MJ;Cavicchioli R, 2009, 'Normalization and statistical analysis of quantitative proteomics data generated by metabolic labeling', Molecular and Cellular Proteomics, vol. 8, pp. 2227 - 2242, http://dx.doi.org/10.1074/mcp.M800462-MCP200
Ambatipudi K;Joss J;Raftery M;Deane E, 2008, 'A proteomic approach to analysis of antimicrobial activity in marsupial pouch secretions', Developmental and Comparative Immunology, vol. 32, pp. 108 - 120, http://dx.doi.org/10.1016/j.dci.2007.04.009
Marçal H;Sarris M;Raftery MJ;Bhasin V;McFarland C;Mahler SM, 2008, 'Expression proteomics of olfactory ensheathing cells', Journal of Chemical Technology and Biotechnology, vol. 83, pp. 473 - 481, http://dx.doi.org/10.1002/jctb.1900
Lim SY;Raftery M;Cai H;Hsu K;Yan WX;Hseih HL;Watts RN;Richardson D;Thomas S;Perry M;Geczy CL, 2008, 'S-nitrosylated S100A8: Novel anti-inflammatory properties', Journal of Immunology, vol. 181, pp. 5627 - 5636, http://dx.doi.org/10.4049/jimmunol.181.8.5627
Dinnes DL M;Marçal H;Raftery MJ;Labow RS;Mahler SM, 2008, 'The macrophage-biomaterial interface: A proteomic analysis of the conditioned medium environment', Journal of Chemical Technology and Biotechnology, vol. 83, pp. 482 - 495, http://dx.doi.org/10.1002/jctb.1854
Raftery MJ, 2008, 'Enrichment by organomercurial agarose and identification of Cys-containing peptides from yeast cell lysates', Analytical Chemistry, vol. 80, pp. 3334 - 3341, http://dx.doi.org/10.1021/ac702539q
Pountney DL;Raftery MJ;Chegini F;Blumbergs PC;Gai WP, 2008, 'NSF, Unc-18-1, dynamin-1 and HSP90 are inclusion body components in neuronal intranuclear inclusion disease identified by anti-SUMO-1-immunocapture', Acta Neuropathologica, vol. 116, pp. 603 - 614, http://dx.doi.org/10.1007/s00401-008-0437-4
Couttas TA;Raftery MJ;Bernardini G;Wilkins MR, 2008, 'Immonium ion scanning for the discovery of post-translational modifications and its application to histones', Journal of Proteome Research, vol. 7, pp. 2632 - 2641, http://dx.doi.org/10.1021/pr700644t
Kaakoush NO;Raftery MJ;Mendz GL, 2008, 'Molecular response of campylobacter jejuni to cadmium stress', FEBS Journal, vol. 275, pp. 5021 - 5033
Okoli AS;Raftery MJ;Wilkins MR;Mendz GL, 2007, 'Proteomic investigation of effects of Helicobacter bilis on human hepatoma Huh7 cell line', ZOONOSES AND PUBLIC HEALTH, vol. 54, pp. 88 - 88, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000250519200296&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a
McCann LA;Haywood MC;Bin HR;Simpson AM;Guilhaus M;Wasinger VC;Raftery MJ;Davey RA, 2007, 'Identification of vascular surface proteins by in vivo biotinylation: A method sufficiently sensitive to detect changes in rat liver 2 weeks after partial hepatectomy', Journal of Proteome Research, vol. 6, pp. 3108 - 3113, http://dx.doi.org/10.1021/pr070032m
Kaakoush NO;Raftery M;Mendz GL, 2007, 'Molecular responses of Campylobacter jejuni to cadmium stress', ZOONOSES AND PUBLIC HEALTH, vol. 54, pp. 61 - 61, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000250519200196&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a
Okoli AS;Wilkins MR;Raftery MJ;Mendz GL, 2007, 'Comparative proteomics study of effects of Helicobacter bilis on Huh7, Huh7 NNeo3-5B(RG), and cured-Huh7 NNeo3-SB(RG) cell lines', HELICOBACTER, vol. 12, pp. 382 - 383, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000249017800026&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a
Fox EM;Raftery M;Goodchild A;Mendz GL, 2007, 'Campylobacter jejuni response to ox-bile stress', FEMS Immunology and Medical Microbiology, vol. 49, pp. 165 - 172, http://dx.doi.org/10.1111/j.1574-695X.2006.00190.x
Evans FF;Raftery MJ;Egan S;Kjelleberg S, 2007, 'Profiling the secretome of the marine bacterium Pseudoalteromonas tunicata using amine-specific isobaric tagging (iTRAQ)', Journal of Proteome Research, vol. 6, pp. 967 - 975, http://dx.doi.org/10.1021/pr060416x
Raftery MJ, 2007, 'Detection and characterization of N-α-chloramines by electrospray tandem mass spectrometry', Analytical Biochemistry, vol. 366, pp. 218 - 227, http://dx.doi.org/10.1016/j.ab.2007.04.016
Tan BM;Tu QV;Kovach Z;Raftery M;Mendz GL, 2007, 'Wolinella succinogenes response to ox-bile stress', Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology, vol. 92, pp. 319 - 330, http://dx.doi.org/10.1007/s10482-007-9151-9
Okoli AS;Fox EM;Raftery MJ;Mendz GL, 2007, 'Effects of Helicobacter hepaticus on the proteome of HEp-2 cells', Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology, vol. 92, pp. 289 - 300, http://dx.doi.org/10.1007/s10482-007-9155-5
Marcal H;Raftery M;Sarris M;Mcfarland C;Milthorpe BK;Bhasin V;Mackay-Sim A;Mahler S, 2006, 'Secretome analysis of olfactory ensheathing cells for use in tissue engineering and regenerative medicine applications', MOLECULAR & CELLULAR PROTEOMICS, vol. 5, pp. S92 - S92, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000241506400211&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a
Ambatipudi K;Old J;Guilhaus M;Raftery M;Hinds L;Deane E, 2006, 'Proteomic analysis of the neutrophil proteins of the tammar wallaby (Macropus eugenii).', Comp Biochem Physiol Part D Genomics Proteomics, vol. 1, pp. 283 - 291, http://dx.doi.org/10.1016/j.cbd.2006.05.002
Okoli AS;Fox EM;Raftery MJ;Mendz GL, 2006, 'Response of HEp-2 cells to Helicobacter hepaticus', HELICOBACTER, vol. 11, pp. 409 - 409, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000239005100264&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a
Saunders NF W;Ng C;Raftery M;Guilhaus M;Goodchild A;Cavicchioli R, 2006, 'Proteomic and computational analysis of secreted proteins with type I signal peptides from the antarctic archaeon Methanococcoides burtonii', Journal of Proteome Research, vol. 5, pp. 2457 - 2464, http://dx.doi.org/10.1021/pr060220x
Rahimi F;Shepherd CE;Halliday GM;Geczy CL;Raftery MJ, 2006, 'Antigen-epitope retrieval to facilitate proteomic analysis of formalin-fixed archival brain tissue', Analytical Chemistry, vol. 78, pp. 7216 - 7221, http://dx.doi.org/10.1021/ac060294s
Cavicchioli R;Goodchild A;Raftery M, 2005, 'Proteomics of archaea', Methods of Biochemical Analysis, vol. 51, pp. 57 - 72
Pountney DL;Treweek TM;Chataway T;Huang Y;Chegini F;Blumbergs PC;Raftery MJ;Gai WP, 2005, 'αB-Crystallin is a major component of glial cytoplasmic inclusions in multiple system atrophy', Neurotoxicity Research, vol. 7, pp. 77 - 85, http://dx.doi.org/10.1007/BF03033778
Pountney DL;Treweek TM;Chataway T;Huang Y;Chegini F;Blumbergs PC;Raftery MJ;Gai WP, 2005, 'alpha B-crystallin is a major component of glial cytoplasmic inclusions in multiple system atrophy', NEUROTOXICITY RESEARCH, vol. 7, pp. 77 - 85, http://dx.doi.org/10.1007/BF03033778
Ping P;Vondriska TM;Creighton CJ;Gandhi TK B;Yang Z;Menon R;Kwon MS;Cho SY;Drwal G;Kellmann M;Peri S;Suresh S;Gronborg M;Molina H;Chaerkady R;Rekha B;Shet AS;Gerszten RE;Wu H;Raftery M;Wasinger V;Schulz-Knappe P;Hanash SM;Paik YK;Hancock WS;States DJ;Omenn GS;Pandey A, 2005, 'A functional annotation of subproteomes in human plasma', Proteomics, vol. 5, pp. 3506 - 3519, http://dx.doi.org/10.1002/pmic.200500140
Yamauchi R;Southwell-Keely P;Suarna C;Ray S;Raftery M;Cynshi O;Stocker R, 2005, 'Characterization of the oxidation products of BO-653 formed during peroxyl radical-mediated oxidation of human plasma', Free Radical Biology and Medicine, vol. 38, pp. 32 - 40, http://dx.doi.org/10.1016/j.freeradbiomed.2004.09.018
Mithieux SM;Wise SG;Raftery MJ;Starcher B;Weiss AS, 2005, 'A model two-component system for studying the architecture of elastin assembly in vitro', Journal of Structural Biology, vol. 149, pp. 282 - 289, http://dx.doi.org/10.1016/j.jsb.2004.11.005
Goodchild A;Raftery M;Saunders NF W;Guilliaus M;Cavicchioli R, 2005, 'Cold adaptation of the antarctic archaeon, Methanococcoides burtonii assessed by proteomics using ICAT', Journal of Proteome Research, vol. 4, pp. 473 - 480, http://dx.doi.org/10.1021/pr049760p
Saunders NF W;Goodchild A;Raftery M;Guilhaus M;Curmi PM G;Cavicchioli R, 2005, 'Predicted roles for hypothetical proteins in the low-temperature expressed proteome of the antarctic archaeon Methanococcoides burtonii', Journal of Proteome Research, vol. 4, pp. 464 - 472, http://dx.doi.org/10.1021/pr049797+
Wise SG;Mithieux SM;Raftery MJ;Weiss AS, 2005, 'Specificity in the coacervation of tropoelastin: Solvent exposed lysines', Journal of Structural Biology, vol. 149, pp. 273 - 281, http://dx.doi.org/10.1016/j.jsb.2004.11.006
Raftery MJ, 2005, 'Selective detection of thiosulfate-containing peptides usine tandem mass spectrometry', Rapid Communications in Mass Spectrometry, vol. 19, pp. 674 - 682, http://dx.doi.org/10.1002/rcm.1840
Raftery M;Campbell R;Glaros EN;Rye KA;Halliday GM;Jessup W;Garner B, 2005, 'Phosphorylation of apolipoprotein-E at an atypical protein kinase CK2 PSD/E site in vitro', Biochemistry, vol. 44, pp. 7346 - 7353, http://dx.doi.org/10.1021/bi0504052
Rayner BS;Wu BJ;Raftery M;Stocker R;Witting PK, 2005, 'Human S-nitroso oxymyoglobin is a store of vasoactive nitric oxide', Journal of Biological Chemistry, vol. 280, pp. 9985 - 9993, http://dx.doi.org/10.1074/jbc.M410564200
Witting PK;Wu BJ;Raftery M;Southwell-Keely P;Stocker R, 2005, 'Probucol protects against hypochlorite-induced endothelial dysfunction: Identification of a novel pathway of probucol oxidation to a biologically active intermediate', Journal of Biological Chemistry, vol. 280, pp. 15612 - 15618, http://dx.doi.org/10.1074/jbc.M414256200
Wasinger VC;Locke VL;Raftery MJ;Larance M;Rothemund D;Liew A;Bate I;Guilhaus M, 2005, 'Two-dimensional liquid chromatography/tandem mass spectrometry analysis of Gradiflow™ fractionated native human plasma', Proteomics, vol. 5, pp. 3397 - 3401, http://dx.doi.org/10.1002/pmic.200401160
Witting P;Wu BJ;Raftery MJ;Southwell-Keely PT;Stocker R, 2005, 'Probucol Protects against hypochlorite-induced Endothelial Dysfunction', The Journal of Biological Chemistry, vol. 280, pp. 15612 - 15618
Zhao Z;Raftery MJ;Niu XM;Daja MM;Russell PJ, 2004, 'Application of in-gel protease assay in biological sample: Characterization and identification of urokinase-type plasminogen activator (uPA) in secreted proteins from a prostate cancer cell line PC-3', Electrophoresis, vol. 25, pp. 1142 - 1148
Nichols DS;Miller MR;Davies NW;Goodchild A;Raftery M;Cavicchioli R, 2004, 'Cold adaptation in the Antarctic archaeon Methanococcoides burtonii involves membrane lipid unsaturation', Journal of Bacteriology, vol. 186, pp. 8508 - 8515, http://dx.doi.org/10.1128/JB.186.24.8508-8515.2004
Byrne CJ;Cooper MA;Cowled PA;Johnstone RA W;Mackenzie L;Marshallsay LV;Morris IK;Muldoon CA;Raftery MJ;Yin SS;Ward AD, 2004, 'The photodynamic therapy (PDT) anticancer activity of a range of porphyrin dimers and related compounds derived from hematoporphyrin', Australian Journal of Chemistry, vol. 57, pp. 1091 - 1102, http://dx.doi.org/10.1071/CH04062
Goodchild A;Saunders NF W;Ertan H;Raftery M;Guilhaus M;Curmi PM G;Cavicchioli R, 2004, 'A proteomic determination of cold adaptation in the Antarctic archaeon, Methanococcoides burtonii', Molecular Microbiology, vol. 53, pp. 309 - 321, http://dx.doi.org/10.1111/j.1365-2958.2004.04130.x
Goodchild A;Raftery M;Saunders NF W;Guilhaus M;Cavicchioli R, 2004, 'Biology of the cold adapted archaeon, Methanococcoides burtonii determined by proteomics using liquid chromatography-tandem mass spectrometry', Journal of Proteome Research, vol. 3, pp. 1164 - 1176, http://dx.doi.org/10.1021/pr0498988
Toh M;Moffitt MC;Henrichsen L;Raftery M;Barrow K;Cox JM;Marquis CP;Neilan BA, 2004, 'Cereulide, the emetic toxin of Bacillus cereus, is putatively a product of nonribosomal peptide synthesis', Journal of Applied Microbiology, vol. 97, pp. 992 - 1000, http://dx.doi.org/10.1111/j.1365-2672.2004.02381.x
Rayner BS;Wu BJ;Raftery M;Stocker R;Witting PK, 2004, 'Regulation of vascular tone by S-nitroso-myoglobin', Redox Report, vol. 9, pp. 382 - 386, http://dx.doi.org/10.1179/135100004225006920
Pankhurst G;Wang XL;Wilcken DE;Baernthaler G;Panzenböck U;Raftery M;Stocker R, 2003, 'Characterization of specifically oxidized apolipoproteins in mildly oxidized high density lipoprotein', Journal of Lipid Research, vol. 44, pp. 349 - 355, http://dx.doi.org/10.1194/jlr.M200256-JLR200
Raftery MJ;Saldanha RG;Geczy CL;Kumar RK, 2003, 'Mass spectrometric analysis of electrophoretically separated allergens and proteases in grass pollen diffusates', Respiratory Research, vol. 4, http://dx.doi.org/10.1186/1465-9921-4-10
Wang HW;McNeil HP;Husain A;Liu K;Tedla N;Thomas PS;Raftery M;King GC;Cai ZY;Hunt JE, 2002, 'δ tryptase is expressed in multiple human tissues, and a recombinant form has proteolytic activity', Journal of Immunology, vol. 169, pp. 5145 - 5152
Mashima R;Tilley L;Siomos MA;Papalexis V;Raftery MJ;Stocker R, 2002, 'Plasmodium falciparum histidine-rich protein-2 (PfHRP2) modulates the redox activity of ferri-protoporphyrin IX (FePPIX): Peroxidase-like activity of the PfHRP2-FePPIX complex', Journal of Biological Chemistry, vol. 277, pp. 14514 - 14520, http://dx.doi.org/10.1074/jbc.M109386200
Raftery MJ;Geczy CL, 2002, 'Electrospray low energy CID and MALDI PSD fragmentations of protonated sulfinamide cross-linked peptides', Journal of the American Society for Mass Spectrometry, vol. 13, pp. 709 - 718, http://dx.doi.org/10.1016/S1044-0305(02)00359-8
Raftery MJ;Geczy CL, 2002, 'Reactions of S100 protein-containing cys-sulfenic acids formed by HOCI oxidation', Proceedings 50th ASMS Conference on Mass Spectrometry and Allied Topics, pp. 299 - 300
Hsu K;Raftery MJ;Yang ZL;Geczy C, 2002, 'S100 Proteins in Inflammation: New Aspects of Old Problems', Newsletter for the Australian Society for Biochemistry and Molecular Biology Inc, vol. 33, pp. 13 - 16
Mashima R;Tilley L;Siomos M;Papalexis V;Raftery MJ;Stocker R, 2002, 'Plasmodium falciparum Histidine-rich Protein-2 (PfHRP2) Modulates the Redox Activity of Ferri-protoporphyrin IX (FePPIX)', The Journal of Biological Chemistry, vol. 277, pp. 14514 - 14520
Yang Z;Tao T;Raftery MJ;Youssef P;Di Girolamo N;Geczy CL, 2001, 'Proinflammatory properties of the human S100 protein S100A12', Journal of Leukocyte Biology, vol. 69, pp. 986 - 994
Raftery MJ;Yang Z;Valenzuela SM;Geczy CL, 2001, 'Novel Intra- and Inter-molecular Sulfinamide Bonds in S100A8 Produced by Hypochlorite Oxidation', Journal of Biological Chemistry, vol. 276, pp. 33393 - 33401, http://dx.doi.org/10.1074/jbc.M101566200
Raftery MJ, 2000, 'Characterization of a mutant recombinant S100 protein using electrospray ionization mass spectrometry.', Methods in molecular biology (Clifton, N.J.), vol. 146, pp. 27 - 39
Panzenböck U;Kritharides L;Raftery M;Rye KA;Stocker R, 2000, 'Oxidation of methionine residues to methionine sulfoxides does not decrease potential antiatherogenic properties of apolipoprotein A-I', Journal of Biological Chemistry, vol. 275, pp. 19536 - 19544, http://dx.doi.org/10.1074/jbc.M000458200
Harrison CA;Raftery MJ;Alewood P;Geczy CL, 1999, 'Structure/function studies of S100a8/a9', Letters in Peptide Science, vol. 6, pp. 359 - 369, http://dx.doi.org/10.1007/BF02443433
Raftery MJ;Collinson L;Geczy CL, 1999, 'Overexpression, oxidative refolding, and zinc binding of recombinant forms of the murine S100 protein MRP14 (S100A9)', Protein Expression and Purification, vol. 15, pp. 228 - 235, http://dx.doi.org/10.1006/prep.1998.1015
Harrison CA;Raftery MJ;Walsh J;Alewood P;Iismaa SE;Thliveris S;Geczy CL, 1999, 'Oxidation regulates the inflammatory properties of the murine S100 protein S100A8', Journal of Biological Chemistry, vol. 274, pp. 8561 - 8569, http://dx.doi.org/10.1074/jbc.274.13.8561
Garner B;Witting PK;Waldeck AR;Christison JK;Raftery M;Stocker R, 1998, 'Oxidation of high density lipoproteins. I. Formation of methionine sulfoxide in apolipoproteins AI and AII is an early event that accompanies lipid peroxidation and can be enhanced by α-tocopherol', Journal of Biological Chemistry, vol. 273, pp. 6080 - 6087, http://dx.doi.org/10.1074/jbc.273.11.6080
Raftery MJ;Geczy CL, 1998, 'Identification of posttranslational modifications and cDNA sequencing errors in the rat S100 proteins MRP88 and 14 using electrospray ionization mass spectrometry', Analytical Biochemistry, vol. 258, pp. 285 - 292, http://dx.doi.org/10.1006/abio.1997.2601
Raftery MJ;Geczy CL, 1998, 'Identification of noncovalent dimeric complexes of the recombinant murine S100 protein CP10 by electrospray ionization mass spectrometry and chemical cross-linking', Journal of the American Society for Mass Spectrometry, vol. 9, pp. 533 - 539, http://dx.doi.org/10.1016/S1044-0305(98)00020-8
Raftery MJ;Harrison CA;Geczy CL, 1997, 'Characterization of a mutant recombinant S100 protein using electrospray ionization mass spectrometry', Rapid Communications in Mass Spectrometry, vol. 11, pp. 405 - 409, http://dx.doi.org/10.1002/(SICI)1097-0231(19970228)11:4<405::AID-RCM823>3.0.CO;2-A
Bradford AM;Raftery MJ;Bowie JH;Tyler MJ;Wallace JC;Adams GW;Severini C, 1996, 'Novel uperin peptides from the dorsal glands of the australian floodplain toadlet Uperoleia inundata', Australian Journal of Chemistry, vol. 49, pp. 475 - 484
Raftery MJ;Waugh RJ;Bowie JH;Wallace JC;Tyler MJ, 1996, 'The structures of the frenatin peptides from the skin secretion of the giant tree frog Litoria infrafrenata', Journal of Peptide Science, vol. 2, pp. 117 - 124, http://dx.doi.org/10.1002/(SICI)1099-1387(199603)2:2<117::AID-PSC60>3.0.CO;2-R
Dua S;Buntine MA;Raftery MJ;Eichinger PC H;Bowie JH, 1996, 'The mechanism of methanol loss from the (M-H) ions of cis- And trans-4-methoxycyclohexanol. the application of experiment and theory in concert', Journal of the Chemical Society. Perkin Transactions 2, pp. 2489 - 2496, http://dx.doi.org/10.1039/p29960002489
Raftery MJ;Bradford AM;Bowie JH;Wallace JC;Tyler MJ, 1993, 'Peptides from australian frogs. The structures of the dynastins from the banjo frogs limnodynastes interioris, limnodynastes dumerilii and limnodynastes terraereginae', Australian Journal of Chemistry, vol. 46, pp. 833 - 842, http://dx.doi.org/10.1071/CH9930833
Gallwitz WE;Mundy GR;Lee CH;Qiao M;Roodman GD;Raftery M;Gaskell SJ;Bonewald LF, 1993, '5-Lipoxygenase metabolites of arachidonic acid stimulate isolated osteoclasts to resorb calcified matrices', Journal of Biological Chemistry, vol. 268, pp. 10087 - 10094
Bradford AM;Raftery MJ;Bowie JH;Wallace JC;Tyler MJ, 1993, 'Peptides from australian frogs. The structures of the dynastins from limnodynastes salmini and fletcherin from limnodynastes fletcheri', Australian Journal of Chemistry, vol. 46, pp. 1235 - 1244, http://dx.doi.org/10.1071/CH9931235
Raftery MJ;Justesen U;Jaeschke H;Gaskell SJ, 1992, 'Mass spectrometric quantification of cysteine‐containing leukotrienes in rat bile using 13C‐labeled internal standards', Biological Mass Spectrometry, vol. 21, pp. 509 - 516, http://dx.doi.org/10.1002/bms.1200211008
Ballard KD;Raftery MJ;Jaeschke H;Gaskell SJ, 1991, 'Multiple scan modes in the hybrid tandem mass spectrometric screening and characterization of the glutathione conjugate of 2-furamide', Journal of the American Society for Mass Spectrometry, vol. 2, pp. 55 - 68, http://dx.doi.org/10.1016/1044-0305(91)80061-B
Raftery MJ;Gaskell SJ, 1991, 'Synthesis of [8,9,10,11‐13C4]leukotriene C4', Journal of Labelled Compounds and Radiopharmaceuticals, vol. 29, pp. 313 - 318, http://dx.doi.org/10.1002/jlcr.2580290309
Alexander MJ;Raftery MJ;Bowie JH;Hayes RN, 1990, 'The unusual collision‐induced dissociations of deprotonated cyclopentanones', Rapid Communications in Mass Spectrometry, vol. 4, pp. 277 - 278, http://dx.doi.org/10.1002/rcm.1290040803
Raftery MJ;Thorne GC;Orkiszewski RS;Gaskell SJ, 1990, 'Preparation and tandem mass spectrometric analyses of deuterium‐labeled cysteine‐containing leukotrienes', Biological Mass Spectrometry, vol. 19, pp. 465 - 474, http://dx.doi.org/10.1002/bms.1200190804
Raftery MJ;Bowie JH, 1988, 'Does the dieckmann condensation occur in the gas phase?', Organic Mass Spectrometry, vol. 23, pp. 719 - 722, http://dx.doi.org/10.1002/oms.1210231008
Raftery MJ;Bowie JH, 1988, 'The collision-induced dissociations of deprotonated amines in the gas phase', Australian Journal of Chemistry, vol. 41, pp. 1477 - 1489, http://dx.doi.org/10.1071/CH9881477
Raftery MJ;Bowie JH, 1988, 'The collision-induced dissociations of deprotonated amides in the gas phase', International Journal of Mass Spectrometry and Ion Processes, vol. 85, pp. 167 - 186, http://dx.doi.org/10.1016/0168-1176(88)83013-1
Raftery MJ;Bowie JH;Sheldon JC, 1988, 'Collision-induced dissociations of aryl-substituted alkoxide ions. Losses of dihydrogen and rearrangement processes', Journal of the Chemical Society, Perkin Transactions 2, pp. 563 - 569, http://dx.doi.org/10.1039/P29880000563
Raftery MJ;Bowie JH, 1987, 'Carbanion rearrangements. Collision-induced reactions of enolate negative ions derived from dimethyl succinates and hexane-2, 5-dione', Australian Journal of Chemistry, vol. 40, pp. 711 - 721, http://dx.doi.org/10.1071/CH9870711
Raftery MJ;Bowie JH, 1987, 'Collision-induced dissociations of enolate negative ions. Deprotonated cyclohexanones', International Journal of Mass Spectrometry and Ion Processes, vol. 79, pp. 267 - 285, http://dx.doi.org/10.1016/0168-1176(87)83005-7
Bowie JH;Hayes RN;Mitkas S;Prager RH;Raftery MJ;Skelton BW;Stringer MB;White AH, 1985, '1-Benzazepines. The Synthesis and Reactivity of 2-Chloro-l, 5-dimethyl-1H-1-benzazepines', Australian Journal of Chemistry, vol. 39, pp. 529 - 539, http://dx.doi.org/10.1071/CH9860529
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